STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D8BTBC1 domain family member 8B. (1020 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 
  0.898
DNAJC6
Uncharacterized protein.
   
 
  0.535
GAPVD1
GTPase activating protein and VPS9 domains 1.
   
 
 0.531
TBC1D25
TBC1 domain family member 25.
   
  
 0.509
MIPOL1
Uncharacterized protein.
   
    0.481
TBCA
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.477
RAB26
Uncharacterized protein.
      
 0.468
K7E8A6_ORNAN
Uncharacterized protein.
   
 
  0.450
AP1B1
AP complex subunit beta.
   
 
  0.448
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
   
 
  0.443
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.