STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (953 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.994
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.990
F6ZF53_ORNAN
Uncharacterized protein.
    
 0.974
DDX58
DExD/H-box helicase 58.
    
 0.964
TRAF2
RING-type domain-containing protein.
    
 0.957
RNF31
Uncharacterized protein.
    
 0.946
RPS27A
Ribosomal protein S27a.
   
 0.941
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.934
MIB2
SH3_15 domain-containing protein.
    
 0.924
K7EC39_ORNAN
ANK_REP_REGION domain-containing protein.
    
 0.924
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.