DCLK1 protein (Ornithorhynchus anatinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DCLK1

Doublecortin like kinase 1. (729 aa)

Predicted Functional Partners:

F6TMY6_ORNAN

0.790

TUBA1B

0.729

K7E9U1_ORNAN

0.729

TUBA8

0.729

K7EEY1_ORNAN

0.729

K7EFK4_ORNAN

0.729

K7EIA3_ORNAN

0.729

F6Y899_ORNAN

0.704

TUBB6

0.652

F6TYN8_ORNAN

0.652

Your Current Organism:

Ornithorhynchus anatinus

NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCLK1	F6TMY6_ORNAN	ENSOANP00000024392	ENSOANP00000003719	Doublecortin like kinase 1.	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	0.790
DCLK1	F6TYN8_ORNAN	ENSOANP00000024392	ENSOANP00000006449	Doublecortin like kinase 1.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.652
DCLK1	F6Y899_ORNAN	ENSOANP00000024392	ENSOANP00000027496	Doublecortin like kinase 1.	Doublecortin domain-containing protein.	0.704
DCLK1	K7E9U1_ORNAN	ENSOANP00000024392	ENSOANP00000030298	Doublecortin like kinase 1.	Tubulin_C domain-containing protein.	0.729
DCLK1	K7EEY1_ORNAN	ENSOANP00000024392	ENSOANP00000032088	Doublecortin like kinase 1.	Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.729
DCLK1	K7EFK4_ORNAN	ENSOANP00000024392	ENSOANP00000032311	Doublecortin like kinase 1.	Tubulin domain-containing protein.	0.729
DCLK1	K7EIA3_ORNAN	ENSOANP00000024392	ENSOANP00000033260	Doublecortin like kinase 1.	Tubulin domain-containing protein.	0.729
DCLK1	TUBA1B	ENSOANP00000024392	ENSOANP00000012268	Doublecortin like kinase 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.729
DCLK1	TUBA8	ENSOANP00000024392	ENSOANP00000030844	Doublecortin like kinase 1.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.729
DCLK1	TUBB6	ENSOANP00000024392	ENSOANP00000004826	Doublecortin like kinase 1.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.652
F6TMY6_ORNAN	DCLK1	ENSOANP00000003719	ENSOANP00000024392	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Doublecortin like kinase 1.	0.790
F6TMY6_ORNAN	K7E9U1_ORNAN	ENSOANP00000003719	ENSOANP00000030298	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin_C domain-containing protein.	0.900
F6TMY6_ORNAN	K7EEY1_ORNAN	ENSOANP00000003719	ENSOANP00000032088	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin_C domain-containing protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.970
F6TMY6_ORNAN	K7EFK4_ORNAN	ENSOANP00000003719	ENSOANP00000032311	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin domain-containing protein.	0.724
F6TMY6_ORNAN	K7EIA3_ORNAN	ENSOANP00000003719	ENSOANP00000033260	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin domain-containing protein.	0.720
F6TMY6_ORNAN	TUBA1B	ENSOANP00000003719	ENSOANP00000012268	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.730
F6TMY6_ORNAN	TUBA8	ENSOANP00000003719	ENSOANP00000030844	Melanocyte-stimulating hormone receptor; Belongs to the tubulin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.732
F6TYN8_ORNAN	DCLK1	ENSOANP00000006449	ENSOANP00000024392	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Doublecortin like kinase 1.	0.652
F6TYN8_ORNAN	F6Y899_ORNAN	ENSOANP00000006449	ENSOANP00000027496	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Doublecortin domain-containing protein.	0.520
F6TYN8_ORNAN	K7E9U1_ORNAN	ENSOANP00000006449	ENSOANP00000030298	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	Tubulin_C domain-containing protein.	0.753