STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH6Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins. (791 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.762
F7G0G1_ORNAN
Uncharacterized protein.
    
 0.715
CDH18
Cadherin 18; Cadherins are calcium-dependent cell adhesion proteins.
   
0.711
CDH12
Cadherin 12; Cadherins are calcium-dependent cell adhesion proteins.
  
  
0.695
CDH9
Cadherin 9; Cadherins are calcium-dependent cell adhesion proteins.
  
  
0.692
CDH15
Cadherin 15; Cadherins are calcium-dependent cell adhesion proteins.
     
0.682
CDH17
Uncharacterized protein.
     
0.680
CDH2
Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.
  
  
0.670
CTNNA1
Catenin alpha 1.
    
 0.669
F6T6E2_ORNAN
Uncharacterized protein.
    
 0.669
Your Current Organism:
Ornithorhynchus anatinus
NCBI taxonomy Id: 9258
Other names: O. anatinus, Platypus anatinus, duck-billed platypus, duckbill platypus, platypus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.