STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAM01682.1Putative ABC transporter permease protein. (281 aa)    
Predicted Functional Partners:
BAM01683.1
Putative ABC transporter permease protein.
   0.953
araP-2
L-arabinose ABC transporter permease protein.
 
   0.830
araP
L-arabinose ABC transporter permease protein.
   0.829
BAM00856.1
Putative ABC transporter permease protein.
   0.827
BAM00349.1
Putative ABC transporter permease protein.
 
   0.826
BAM00835.1
Putative ABC transporter permease protein.
 
   0.826
BAM01141.1
Putative ABC transporter permease protein.
   0.826
BAM01707.1
Putative ABC transporter permease protein.
 
   0.826
BAM01536.1
Putative ABC transporter permease protein.
 
   0.825
BAM01602.1
Putative ABC transporter permease protein.
  
   0.825
Your Current Organism:
Caldilinea aerophila
NCBI taxonomy Id: 926550
Other names: C. aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila DSM 14535, Caldilinea aerophila DSM 14535 = NBRC 104270, Caldilinea aerophila NBRC 104270, Caldilinea aerophila NBRC 104270 = DSM 14535, Caldilinea aerophila STL-6-O1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.