STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA79245.1Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family. (286 aa)    
Predicted Functional Partners:
AGA78862.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Protein of unknown function (DUF3738); AhpC/TSA family.
  
     0.702
AGA80111.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
  
     0.692
AGA76640.1
PFAM: AhpC/TSA family.
  
     0.668
AGA77080.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin.
  
     0.625
AGA79246.1
PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain.
       0.594
AGA79247.1
TIGR00370 family protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein.
       0.594
AGA80631.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
  
     0.582
AGA78091.1
Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
  
 0.557
AGA79156.1
Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
  
 0.557
AGA80558.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: Protein of unknown function (DUF3738); AhpC/TSA family.
  
     0.552
Your Current Organism:
Echinicola vietnamensis
NCBI taxonomy Id: 926556
Other names: E. vietnamensis DSM 17526, Echinicola vietnamensis DSM 17526
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.