STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIJ39893.1PFAM: Universal stress protein family. (273 aa)    
Predicted Functional Partners:
EIJ39894.1
PFAM: Protein of unknown function (DUF3478).
 
    0.691
EIJ39301.1
PFAM: Universal stress protein family.
  
     0.653
EIJ39897.1
Ca2+/Na+ antiporter; PFAM: Sodium/calcium exchanger protein.
 
     0.639
EIJ39895.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2188).
  
    0.593
EIJ38150.1
Hypothetical protein.
  
     0.565
EIJ39896.1
Hypothetical protein.
       0.508
EIJ37502.1
PFAM: Universal stress protein family.
  
     0.482
EIJ37541.1
Putative permease; PFAM: EamA-like transporter family.
  
     0.464
EIJ39907.1
PFAM: Protein of unknown function (DUF3478).
 
    0.417
EIJ39898.1
Co/Zn/Cd efflux system component; PFAM: Cation efflux family.
       0.416
Your Current Organism:
Joostella marina
NCBI taxonomy Id: 926559
Other names: J. marina DSM 19592, Joostella marina DSM 19592, Joostella marina En5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.