Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANT_00390 | ANT_06070 | ANT_00390 | ANT_06070 | Hypothetical protein. | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.754 |
ANT_00390 | ANT_11400 | ANT_00390 | ANT_11400 | Hypothetical protein. | Cell cycle protein; Belongs to the SEDS family. | 0.829 |
ANT_00390 | ddl | ANT_00390 | ANT_23430 | Hypothetical protein. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.754 |
ANT_00390 | ftsQ | ANT_00390 | ANT_23440 | Hypothetical protein. | Putative cell division protein FtsQ. | 0.906 |
ANT_00390 | murC | ANT_00390 | ANT_23400 | Hypothetical protein. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.541 |
ANT_00390 | murD | ANT_00390 | ANT_23360 | Hypothetical protein. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.732 |
ANT_00390 | murF | ANT_00390 | ANT_23340 | Hypothetical protein. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.432 |
ANT_06070 | ANT_00390 | ANT_06070 | ANT_00390 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Hypothetical protein. | 0.754 |
ANT_06070 | ANT_09860 | ANT_06070 | ANT_09860 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Hypothetical protein. | 0.646 |
ANT_06070 | ANT_11400 | ANT_06070 | ANT_11400 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Cell cycle protein; Belongs to the SEDS family. | 0.840 |
ANT_06070 | alr | ANT_06070 | ANT_13110 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Queuine tRNA-ribosyltransferase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.922 |
ANT_06070 | ddl | ANT_06070 | ANT_23430 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.908 |
ANT_06070 | ftsA | ANT_06070 | ANT_23450 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | 0.805 |
ANT_06070 | ftsQ | ANT_06070 | ANT_23440 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Putative cell division protein FtsQ. | 0.830 |
ANT_06070 | murC | ANT_06070 | ANT_23400 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.727 |
ANT_06070 | murD | ANT_06070 | ANT_23360 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.758 |
ANT_06070 | murF | ANT_06070 | ANT_23340 | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.955 |
ANT_09860 | ANT_06070 | ANT_09860 | ANT_06070 | Hypothetical protein. | Putative D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.646 |
ANT_09860 | ANT_11400 | ANT_09860 | ANT_11400 | Hypothetical protein. | Cell cycle protein; Belongs to the SEDS family. | 0.486 |
ANT_09860 | ftsQ | ANT_09860 | ANT_23440 | Hypothetical protein. | Putative cell division protein FtsQ. | 0.528 |
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