STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (319 aa)    
Predicted Functional Partners:
ANT_28320
Putative pyruvate:ferredoxin oxidoreductase.
  
 0.994
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.982
ANT_18150
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 
 0.979
tal/pgi
Transaldolase/glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 0.948
ANT_04500
Putative 2-oxoglutarate ferredoxin oxidoreductase alpha subunit.
  
 
 0.941
ANT_04510
Putative 2-oxoglutarate ferredoxin oxidoreductase beta subunit.
  
 
 0.938
ANT_18140
Putative 2-oxoglutarate ferredoxin oxidoreductase beta subunit.
  
 
 0.938
ANT_03940
Isocitrate dehydrogenase [NADP]; Protein synonym:IDH; protein synonym:oxalosuccinate decarboxylase.
  
 
 0.937
pdhA
Putative pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 
 0.929
ANT_17530
Beta-ketoacyl synthase family protein.
  
 
 0.920
Your Current Organism:
Anaerolinea thermophila
NCBI taxonomy Id: 926569
Other names: A. thermophila UNI-1, Anaerolinea thermophila UNI-1
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