STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC15608.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AIC15607.1
Hypothetical protein.
       0.674
rfcL
Replication factor C large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.673
AIC15605.1
Hypothetical protein.
       0.579
accB
acetyl-CoA/ propionyl-CoA carboxylase, carboxyltransferase subunit; Function of strongly homologous gene; enzyme.
       0.556
accC
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylation subunit; Function of strongly homologous gene; enzyme.
       0.535
accA
Biotin carboxyl carrier protein of putative acetyl-CoA/ propionyl-CoA carboxylase; Function of strongly homologous gene; enzyme.
       0.535
AIC15604.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.405
Your Current Organism:
Nitrososphaera viennensis
NCBI taxonomy Id: 926571
Other names: Candidatus Nitrososphaera sp. EN76, N. viennensis EN76, Nitrososphaera viennensis EN76, Nitrososphaera viennensis str. EN76, Nitrososphaera viennensis strain EN76
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