STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF04657.1Double-stranded RNA 3'-methylase. (460 aa)    
Predicted Functional Partners:
AKF04658.1
Serine-threonine phosphatase.
     0.949
AKF08786.1
Bis(5'-nucleosyl)-tetraphosphatase.
  
     0.716
AKF06590.1
Bis(5'-nucleosyl)-tetraphosphatase.
  
     0.696
AKF04293.1
tRNAHis-5'-guanylyltransferase.
  
     0.640
AKF05399.1
ADP-ribosylglycohydrolase.
  
     0.605
AKF04656.1
Hypothetical protein.
       0.570
AKF05373.1
Hypothetical protein.
 
     0.549
AKF09391.1
Hypothetical protein.
 
     0.530
AKF06749.1
Hypothetical protein.
  
     0.520
AKF04787.1
Hypothetical protein.
  
     0.480
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.