STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKF08747.1Hypothetical protein. (567 aa)    
Predicted Functional Partners:
AKF10968.1
BNR repeat domain protein.
  
     0.688
AKF05254.1
ASPIC/UnbV domain-containing protein.
  
     0.610
AKF08748.1
Hypothetical protein.
  
     0.597
AKF08745.1
Transporter.
 
     0.593
AKF06771.1
Hypothetical protein.
  
     0.575
AKF08746.1
Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA.
       0.543
AKF10599.1
Hypothetical protein.
  
     0.465
AKF08288.1
Hypothetical protein.
  
     0.463
AKF07597.1
Type III secretion bridge between inner and outermembrane lipoprotein.
  
  
 0.458
AKF10600.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.