STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pphBSerine/threonine protein phosphatase 1. (243 aa)    
Predicted Functional Partners:
cph2_2
Diguanylate cyclase/phosphodiesterase.
  
 
 0.937
SFC76412.1
GAF domain-containing protein.
  
 
 0.884
SFD48916.1
Ferredoxin.
     
 0.782
tsr_3
Methyl-accepting chemotaxis protein.
    
 0.781
barA_2
Histidine kinase.
  
 
 0.761
luxQ_1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.757
luxQ_2
GAF sensor hybrid histidine kinase.
   
 
 0.757
arcB
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.757
SFD14055.1
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.757
SFD51088.1
TolB amino-terminal domain-containing protein.
    
  0.719
Your Current Organism:
Epibacterium multivorans
NCBI taxonomy Id: 928856
Other names: CECT 7557, DSM 26470, E. multivorans, KCTC 23350, Tropicibacter multivorans, Tropicibacter multivorans Lucena et al. 2012, Tropicibacter sp. CECT 7557, strain MD5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.