STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04252.1PFAM: Cytidylyltransferase family; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: dfe:Dfer_2993 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase. (278 aa)    
Predicted Functional Partners:
AFK02931.1
PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP: Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: lby:Lbys_3170 undecaprenyl diphosphate synthase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; SPTR: Undecaprenyl diphosphate synthase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like.
 
  
 0.980
AFK03845.1
PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: dfe:Dfer_5066 CDP-diacylglycerol/serineO-phosphatidyltransfera se; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol/serineO-phosphatidyltransfera se; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase.
    
 0.927
AFK02037.1
PFAM: Prokaryotic diacylglycerol kinase; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: dfe:Dfer_4888 diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; SPTR: Putative uncharacterized protein.
    
 0.918
AFK02714.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: sli:Slin_5448 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase.
    
 0.911
AFK02905.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: lby:Lbys_2822 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase.
    
 0.911
AFK03050.1
PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: sli:Slin_4584 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; manually curated.
    
 0.911
AFK04251.1
KEGG: osp:Odosp_0510 hypothetical protein.
       0.773
AFK03034.1
PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: sli:Slin_5648 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase.
      0.762
AFK02760.1
PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR013512:IPR013644:IPR003821; KEGG: sli:Slin_5921 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: [...]
  
  
 0.761
AFK02604.1
PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: lby:Lbys_2063 triosephosphate isomerase; PFAM: Triosephosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase.
 
  
 0.694
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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