STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK04842.1KEGG: dfe:Dfer_4777 hypothetical protein; SPTR: Putative uncharacterized protein. (428 aa)    
Predicted Functional Partners:
AFK05040.1
KEGG: sli:Slin_6621 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.961
AFK04841.1
Hypothetical protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: sli:Slin_3209 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFK03647.1
KEGG: lby:Lbys_2722 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AFK02450.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: sli:Slin_3226 hypothetical protein; SPTR: Putative membrane protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes.
  
     0.770
AFK01693.1
Tetratricopeptide TPR_2 repeat-containing protein; InterPro IPR019734:IPR013105:IPR001440; KEGG: sli:Slin_3219 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
     0.769
AFK02794.1
KEGG: dfe:Dfer_4247 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.762
AFK01832.1
TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: dfe:Dfer_4560 protein involved in gliding motility GldD; SPTR: Protein involved in gliding motility GldD; TIGRFAM: Gliding motility-associated lipoprotein, GldD.
  
     0.750
AFK01876.1
KEGG: lby:Lbys_3396 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
AFK03214.1
KEGG: lby:Lbys_2023 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.749
AFK03336.1
Hypothetical protein; TIGRFAM: gliding motility-associated lipoprotein GldB; KEGG: lby:Lbys_2934 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.747
Your Current Organism:
Emticicia oligotrophica
NCBI taxonomy Id: 929562
Other names: E. oligotrophica DSM 17448, Emticicia oligotrophica DSM 17448, Emticicia oligotrophica GPTSA100-15, Emticicia oligotrophica str. DSM 17448, Emticicia oligotrophica strain DSM 17448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.