STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_03616Unannotated protein. (764 aa)    
Predicted Functional Partners:
GCA_000519325_04716
Unannotated protein.
  
 0.993
GCA_000519325_05030
Unannotated protein.
  
 0.961
GCA_000519325_02238
Unannotated protein.
 
 0.949
GCA_000519325_02794
Unannotated protein.
 
 0.949
GCA_000519325_02804
Unannotated protein.
 
 0.949
GCA_000519325_05024
Unannotated protein.
   
  0.936
GCA_000519325_02718
Unannotated protein.
  
 0.935
GCA_000519325_03606
Unannotated protein.
 
  
 0.928
GCA_000519325_05041
Unannotated protein.
   
 
 0.927
GCA_000519325_03605
Unannotated protein.
 
  
 0.919
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.