STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519325_03887Unannotated protein. (429 aa)    
Predicted Functional Partners:
GCA_000519325_03886
Unannotated protein.
 
     0.714
GCA_000519325_00226
Unannotated protein.
   
 0.686
GCA_000519325_00051
Unannotated protein.
    
  0.612
GCA_000519325_00115
Unannotated protein.
    
  0.612
GCA_000519325_00196
Unannotated protein.
    
  0.612
GCA_000519325_00227
Unannotated protein.
    
  0.612
GCA_000519325_00625
Unannotated protein.
    
  0.612
GCA_000519325_01094
Unannotated protein.
    
  0.612
GCA_000519325_01198
Unannotated protein.
    
  0.612
GCA_000519325_01295
Unannotated protein.
    
  0.612
Your Current Organism:
Patulibacter minatonensis
NCBI taxonomy Id: 929712
Other names: P. minatonensis DSM 18081, Patulibacter minatonensis DSM 18081, Patulibacter minatonensis KV-614, Patulibacter minatonensis str. DSM 18081, Patulibacter minatonensis strain DSM 18081, actinobacterium KV-614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.