STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHF16580.1YjgP/YjgQ family permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)    
Predicted Functional Partners:
AHF16093.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.982
AHF15057.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.941
AHF16579.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.737
AHF18032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.709
AHF16383.1
Molecular chaperone DnaK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.706
AHF17967.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.678
AHF18030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.650
AHF16560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.646
AHF16740.1
Outer membrane assembly protein YfiO; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.646
AHF15886.1
Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.645
Your Current Organism:
Niabella soli
NCBI taxonomy Id: 929713
Other names: N. soli DSM 19437, Niabella soli DSM 19437, Niabella soli JS13-8, Niabella soli str. DSM 19437, Niabella soli strain DSM 19437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.