STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6XT88_COCCAUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (638 aa)    
Predicted Functional Partners:
W6YK76_COCCA
AA_TRNA_LIGASE_II domain-containing protein.
 
 0.993
W6YGF3_COCCA
Uncharacterized protein.
 
 0.988
W6YP53_COCCA
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.981
W6Y7B9_COCCA
SH3 domain-containing protein.
  
0.975
W6Y3D7_COCCA
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.974
W6YJY7_COCCA
Uncharacterized protein.
 
 0.973
W6YJX1_COCCA
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.968
W6YN87_COCCA
Uncharacterized protein.
   
 
 0.967
W6YAG6_COCCA
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
  
 0.944
W6XQB2_COCCA
Uncharacterized protein.
   
 
 0.922
Your Current Organism:
Bipolaris zeicola
NCBI taxonomy Id: 930089
Other names: B. zeicola 26-R-13, Bipolaris zeicola 26-R-13, Cochliobolus carbonum 26-R-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.