STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV82631.1Cytochrome c550. (169 aa)    
Predicted Functional Partners:
SEV80363.1
Cytochrome c oxidase subunit 2.
  
 0.996
SEV83520.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit.
  
 0.948
SEV83532.1
Menaquinol-cytochrome c reductase cytochrome b subunit.
  
 0.948
SEW11883.1
Hypothetical protein.
  
 0.948
SEW14283.1
FAD dependent oxidoreductase.
  
 0.933
SEV80381.1
Cytochrome c oxidase subunit 3.
  
 0.921
SEV80369.1
Cytochrome c oxidase subunit 1.
  
 0.894
SEV85710.1
Cytochrome c oxidase subunit 1.
  
 0.894
SEW14720.1
Cytochrome c oxidase subunit 1.
  
 0.894
SEV83551.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
  
 0.877
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.