STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV92669.1DNA polymerase III, beta subunit. (379 aa)    
Predicted Functional Partners:
SEV83452.1
ATP-dependent DNA helicase DinG.
  
 0.998
SEV86877.1
DNA polymerase I.
 
 0.998
SEV92653.1
Chromosomal replication initiator protein DnaA.
 0.996
SEV85293.1
DNA polymerase III, delta subunit.
  
 
 0.994
SEV86987.1
DNA polymerase III catalytic subunit, DnaE type.
  
 
 0.993
SEW05536.1
DNA polymerase-3 subunit delta; Manually curated.
 
 
 0.988
SEW16970.1
DNA polymerase-3 subunit gamma/tau.
   
 0.988
SEV82190.1
DNA mismatch repair protein MutS.
   
 0.979
SEW12423.1
DNA polymerase-4.
   
 0.973
SEV81840.1
DNA polymerase III catalytic subunit, PolC type.
    
 0.960
Your Current Organism:
Aliicoccus persicus
NCBI taxonomy Id: 930138
Other names: A. persicus, Aliicoccus persicus Amoozegar et al. 2014, CECT 8508, DSM 28306, IBRC-M 10081, Jeotgalicoccus sp. A76(2010), strain A76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.