STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1L1PKHD1 like 1. (4249 aa)    
Predicted Functional Partners:
G3WDS3_SARHA
Uncharacterized protein.
      
 0.514
CDCP2
CUB domain containing protein 2.
    
 0.511
BTNL9
Butyrophilin like 9.
      
 0.448
TSPAN11
Tetraspanin.
      
 0.443
FAM186A
Uncharacterized protein.
   
 
 0.423
CSMD3
Uncharacterized protein.
      
 0.412
IFT81
Intraflagellar transport 81.
      
 0.405
SLC14A2
Solute carrier family 14 member 2.
      
 0.403
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family.
   
  
 0.400
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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