STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2BGeneral transcription factor IIB. (316 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
    
 0.996
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.996
TBP
TATA-box binding protein.
  
 0.995
TBPL2
Uncharacterized protein.
   
 0.994
TBPL1
TATA-box binding protein like 1.
   
 0.991
GTF2E1
General transcription factor IIE subunit 1.
    
 0.991
POLR2G
RNA polymerase II subunit G.
   
 0.990
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.990
POLR2D
RPOL4c domain-containing protein.
    
 0.989
POLR2K
RNA polymerase II subunit K.
   
 0.988
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.