STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX7Paired box 7. (504 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.793
MYOG
Myogenin.
   
 
 0.690
TIMM9
Translocase of inner mitochondrial membrane 9.
   
 
 0.684
NCOA1
Nuclear receptor coactivator.
     
 0.545
CISD2
CDGSH iron sulfur domain 2.
    
 0.523
CACTIN
Uncharacterized protein.
    
 0.523
G3WQ32_SARHA
Cactin_mid domain-containing protein.
    
 0.523
SDHC
Succinate dehydrogenase complex subunit C.
    
 
 0.495
CUX2
Homeobox protein cut-like.
    
 
 0.462
ZBTB48
Zinc finger and BTB domain containing 48.
    
 0.459
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.