STRINGSTRING
CLCA1 protein (Sarcophilus harrisii) - STRING interaction network
"CLCA1" - Chloride channel accessory 1 in Sarcophilus harrisii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCA1Chloride channel accessory 1 (898 aa)    
Predicted Functional Partners:
CLCA2
Chloride channel accessory 2 (944 aa)
     
 
0.817
CWC25
CWC25 spliceosome-associated protein homolog (S. cerevisiae) (417 aa)
     
        0.763
C1orf109
Chromosome 1 open reading frame 109 (203 aa)
     
        0.763
FAM26D
Uncharacterized protein; Family with sequence similarity 26, member D (314 aa)
     
        0.763
SLCO1A2
Solute carrier organic anion transporter family, member 1A2 (662 aa)
     
        0.762
ACOT11
Uncharacterized protein; acyl-CoA thioesterase 11 (215 aa)
     
        0.762
FAM20B
FAM20B, glycosaminoglycan xylosylkinase; Family with sequence similarity 20, member B (409 aa)
     
        0.749
MOCS3
Molybdenum cofactor synthesis 3 (343 aa)
     
        0.747
ANO2
Uncharacterized protein (184 aa)
           
  0.697
ENSSHAG00000002377
annotation not available (474 aa)
           
  0.596
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus harrisii, Sarcophilus laniarius, Tasmanian devil
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