STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN12Calpain 12; Belongs to the peptidase C2 family. (585 aa)    
Predicted Functional Partners:
G3VNG3_SARHA
EF-hand domain-containing protein.
   
0.709
CAST
Uncharacterized protein.
   
 0.587
G3VAI5_SARHA
Uncharacterized protein.
   
 
  0.522
PEF1
Penta-EF-hand domain containing 1.
   
0.438
LRGUK
Guanylate kinase-like domain-containing protein.
   
 
 0.435
SRI
Sorcin.
   
0.424
GCA
Grancalcin.
   
0.424
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.