Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACTL6A | BCL11B | ENSSHAP00000020325 | ENSSHAP00000010778 | Actin like 6A; Belongs to the actin family. | BAF chromatin remodeling complex subunit BCL11B. | 0.511 |
ACTL6A | BRD9 | ENSSHAP00000020325 | ENSSHAP00000010784 | Actin like 6A; Belongs to the actin family. | Bromodomain containing 9. | 0.763 |
BATF | BCL11A | ENSSHAP00000020287 | ENSSHAP00000018617 | Basic leucine zipper ATF-like transcription factor. | BAF chromatin remodeling complex subunit BCL11A. | 0.419 |
BATF | BCL11B | ENSSHAP00000020287 | ENSSHAP00000010778 | Basic leucine zipper ATF-like transcription factor. | BAF chromatin remodeling complex subunit BCL11B. | 0.707 |
BATF | NKAP | ENSSHAP00000020287 | ENSSHAP00000010559 | Basic leucine zipper ATF-like transcription factor. | Nkap_C domain-containing protein. | 0.544 |
BATF | RUNX1 | ENSSHAP00000020287 | ENSSHAP00000017397 | Basic leucine zipper ATF-like transcription factor. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.403 |
BCL11A | BATF | ENSSHAP00000018617 | ENSSHAP00000020287 | BAF chromatin remodeling complex subunit BCL11A. | Basic leucine zipper ATF-like transcription factor. | 0.419 |
BCL11A | BCL11B | ENSSHAP00000018617 | ENSSHAP00000010778 | BAF chromatin remodeling complex subunit BCL11A. | BAF chromatin remodeling complex subunit BCL11B. | 0.532 |
BCL11A | MTA1 | ENSSHAP00000018617 | ENSSHAP00000002001 | BAF chromatin remodeling complex subunit BCL11A. | Metastasis associated 1. | 0.666 |
BCL11B | ACTL6A | ENSSHAP00000010778 | ENSSHAP00000020325 | BAF chromatin remodeling complex subunit BCL11B. | Actin like 6A; Belongs to the actin family. | 0.511 |
BCL11B | BATF | ENSSHAP00000010778 | ENSSHAP00000020287 | BAF chromatin remodeling complex subunit BCL11B. | Basic leucine zipper ATF-like transcription factor. | 0.707 |
BCL11B | BCL11A | ENSSHAP00000010778 | ENSSHAP00000018617 | BAF chromatin remodeling complex subunit BCL11B. | BAF chromatin remodeling complex subunit BCL11A. | 0.532 |
BCL11B | BRD9 | ENSSHAP00000010778 | ENSSHAP00000010784 | BAF chromatin remodeling complex subunit BCL11B. | Bromodomain containing 9. | 0.452 |
BCL11B | CUX1 | ENSSHAP00000010778 | ENSSHAP00000009011 | BAF chromatin remodeling complex subunit BCL11B. | Homeobox protein cut-like. | 0.539 |
BCL11B | MTA1 | ENSSHAP00000010778 | ENSSHAP00000002001 | BAF chromatin remodeling complex subunit BCL11B. | Metastasis associated 1. | 0.459 |
BCL11B | MTA2 | ENSSHAP00000010778 | ENSSHAP00000004118 | BAF chromatin remodeling complex subunit BCL11B. | Metastasis associated 1 family member 2. | 0.457 |
BCL11B | NKAP | ENSSHAP00000010778 | ENSSHAP00000010559 | BAF chromatin remodeling complex subunit BCL11B. | Nkap_C domain-containing protein. | 0.539 |
BCL11B | RUNX1 | ENSSHAP00000010778 | ENSSHAP00000017397 | BAF chromatin remodeling complex subunit BCL11B. | Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. | 0.497 |
BCL11B | TBR1 | ENSSHAP00000010778 | ENSSHAP00000019568 | BAF chromatin remodeling complex subunit BCL11B. | T-box brain transcription factor 1. | 0.543 |
BRD9 | ACTL6A | ENSSHAP00000010784 | ENSSHAP00000020325 | Bromodomain containing 9. | Actin like 6A; Belongs to the actin family. | 0.763 |
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