Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATR | CHEK2 | ENSSHAP00000018700 | ENSSHAP00000011768 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Checkpoint kinase 2. | 0.995 |
ATR | RFX1 | ENSSHAP00000018700 | ENSSHAP00000011635 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Regulatory factor X1. | 0.701 |
CHEK2 | ATR | ENSSHAP00000011768 | ENSSHAP00000018700 | Checkpoint kinase 2. | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | 0.995 |
CHEK2 | RFX1 | ENSSHAP00000011768 | ENSSHAP00000011635 | Checkpoint kinase 2. | Regulatory factor X1. | 0.572 |
CIITA | CREB1 | ENSSHAP00000007451 | ENSSHAP00000016341 | NACHT domain-containing protein. | cAMP responsive element binding protein 1. | 0.540 |
CIITA | RFX1 | ENSSHAP00000007451 | ENSSHAP00000011635 | NACHT domain-containing protein. | Regulatory factor X1. | 0.603 |
CIITA | RFXANK | ENSSHAP00000007451 | ENSSHAP00000013314 | NACHT domain-containing protein. | Regulatory factor X associated ankyrin containing protein. | 0.819 |
CIITA | RFXAP | ENSSHAP00000007451 | ENSSHAP00000011878 | NACHT domain-containing protein. | RFXA_RFXANK_bdg domain-containing protein. | 0.756 |
CREB1 | CIITA | ENSSHAP00000016341 | ENSSHAP00000007451 | cAMP responsive element binding protein 1. | NACHT domain-containing protein. | 0.540 |
CREB1 | RFX1 | ENSSHAP00000016341 | ENSSHAP00000011635 | cAMP responsive element binding protein 1. | Regulatory factor X1. | 0.674 |
CREB1 | RFXANK | ENSSHAP00000016341 | ENSSHAP00000013314 | cAMP responsive element binding protein 1. | Regulatory factor X associated ankyrin containing protein. | 0.538 |
CREB1 | RFXAP | ENSSHAP00000016341 | ENSSHAP00000011878 | cAMP responsive element binding protein 1. | RFXA_RFXANK_bdg domain-containing protein. | 0.560 |
FOXJ2 | NF1 | ENSSHAP00000020202 | ENSSHAP00000022360 | Forkhead box J2. | Neurofibromin 1. | 0.699 |
FOXJ2 | PAX6 | ENSSHAP00000020202 | ENSSHAP00000019208 | Forkhead box J2. | Paired box 6. | 0.705 |
FOXJ2 | RFX1 | ENSSHAP00000020202 | ENSSHAP00000011635 | Forkhead box J2. | Regulatory factor X1. | 0.715 |
NF1 | FOXJ2 | ENSSHAP00000022360 | ENSSHAP00000020202 | Neurofibromin 1. | Forkhead box J2. | 0.699 |
NF1 | NFIC | ENSSHAP00000022360 | ENSSHAP00000010215 | Neurofibromin 1. | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | 0.447 |
NF1 | PAX6 | ENSSHAP00000022360 | ENSSHAP00000019208 | Neurofibromin 1. | Paired box 6. | 0.664 |
NF1 | RFX1 | ENSSHAP00000022360 | ENSSHAP00000011635 | Neurofibromin 1. | Regulatory factor X1. | 0.694 |
NFIC | NF1 | ENSSHAP00000010215 | ENSSHAP00000022360 | Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. | Neurofibromin 1. | 0.447 |
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