STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN3Contactin 3. (1029 aa)    
Predicted Functional Partners:
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.806
APP
Amyloid beta precursor protein.
   
 
 0.700
L1CAM
L1 cell adhesion molecule.
   
0.571
NFASC
Neurofascin.
   
0.570
NRCAM
Neuronal cell adhesion molecule.
   
0.563
CHL1
Cell adhesion molecule L1 like.
   
0.563
G3WYM3_SARHA
Uncharacterized protein.
    
 0.555
DMRT3
Doublesex and mab-3 related transcription factor 3.
      
 0.537
C1orf43
Chromosome 1 open reading frame 43.
      
 0.535
SUSD1
Sushi domain containing 1.
    
 0.526
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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