STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG101Autophagy related 101. (218 aa)    
Predicted Functional Partners:
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
    
 0.999
ULK1
Unc-51 like autophagy activating kinase 1.
    
 0.995
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.994
ULK2
Unc-51 like autophagy activating kinase 2.
    
 0.993
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
     
 0.990
BECN1
Beclin 1.
    
 0.990
ATG14
Autophagy related 14.
    
 0.988
MLST8
MTOR associated protein, LST8 homolog.
     
 0.972
RPTOR
Regulatory associated protein of MTOR complex 1.
     
 0.968
NRBF2
Nuclear receptor binding factor 2.
     
 0.949
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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