STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL23ARibosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (156 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
RPL35
Ribosomal protein L35.
 
 0.971
RPL5
Ribosomal_L18_c domain-containing protein.
  
 0.968
RPL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.966
G3VJX7_SARHA
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.965
G3WK68_SARHA
Uncharacterized protein.
   
 0.964
EPRS1
Glutamyl-prolyl-tRNA synthetase.
  
 0.963
RPL14
Ribosomal protein L14.
  
 0.962
RPL35A
Uncharacterized protein.
   
 0.962
G3W9S0_SARHA
Uncharacterized protein.
   
 0.962
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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