Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDX2 | EOMES | ENSSHAP00000021065 | ENSSHAP00000020497 | Caudal type homeobox 2. | Eomesodermin. | 0.557 |
CDX2 | FGF4 | ENSSHAP00000021065 | ENSSHAP00000002696 | Caudal type homeobox 2. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.580 |
CDX2 | FOXA2 | ENSSHAP00000021065 | ENSSHAP00000017544 | Caudal type homeobox 2. | Forkhead box A2. | 0.573 |
CDX2 | GATA6 | ENSSHAP00000021065 | ENSSHAP00000007832 | Caudal type homeobox 2. | GATA binding protein 6. | 0.649 |
CDX2 | KRT20 | ENSSHAP00000021065 | ENSSHAP00000008418 | Caudal type homeobox 2. | Keratin 20; Belongs to the intermediate filament family. | 0.563 |
CDX2 | NFKB1 | ENSSHAP00000021065 | ENSSHAP00000008514 | Caudal type homeobox 2. | Nuclear factor kappa B subunit 1. | 0.578 |
CDX2 | OGG1 | ENSSHAP00000021065 | ENSSHAP00000000199 | Caudal type homeobox 2. | OGG_N domain-containing protein. | 0.652 |
CDX2 | POU5F1 | ENSSHAP00000021065 | ENSSHAP00000003237 | Caudal type homeobox 2. | POU domain protein. | 0.572 |
CDX2 | SOX17 | ENSSHAP00000021065 | ENSSHAP00000013277 | Caudal type homeobox 2. | Uncharacterized protein. | 0.585 |
CDX2 | TIMP2 | ENSSHAP00000021065 | ENSSHAP00000019741 | Caudal type homeobox 2. | TIMP metallopeptidase inhibitor 2. | 0.557 |
EOMES | CDX2 | ENSSHAP00000020497 | ENSSHAP00000021065 | Eomesodermin. | Caudal type homeobox 2. | 0.557 |
EOMES | FOXA2 | ENSSHAP00000020497 | ENSSHAP00000017544 | Eomesodermin. | Forkhead box A2. | 0.580 |
EOMES | GATA6 | ENSSHAP00000020497 | ENSSHAP00000007832 | Eomesodermin. | GATA binding protein 6. | 0.519 |
EOMES | POU5F1 | ENSSHAP00000020497 | ENSSHAP00000003237 | Eomesodermin. | POU domain protein. | 0.453 |
EOMES | SOX17 | ENSSHAP00000020497 | ENSSHAP00000013277 | Eomesodermin. | Uncharacterized protein. | 0.588 |
FGF4 | CDX2 | ENSSHAP00000002696 | ENSSHAP00000021065 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | Caudal type homeobox 2. | 0.580 |
FGF4 | POU5F1 | ENSSHAP00000002696 | ENSSHAP00000003237 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | POU domain protein. | 0.415 |
FOXA2 | CDX2 | ENSSHAP00000017544 | ENSSHAP00000021065 | Forkhead box A2. | Caudal type homeobox 2. | 0.573 |
FOXA2 | EOMES | ENSSHAP00000017544 | ENSSHAP00000020497 | Forkhead box A2. | Eomesodermin. | 0.580 |
FOXA2 | GATA6 | ENSSHAP00000017544 | ENSSHAP00000007832 | Forkhead box A2. | GATA binding protein 6. | 0.645 |
page 1 of 3