STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKAB1Protein kinase AMP-activated non-catalytic subunit beta 1. (270 aa)    
Predicted Functional Partners:
PRKAA2
Non-specific serine/threonine protein kinase.
    
 0.997
PRKAA1
Non-specific serine/threonine protein kinase.
    
 0.997
PRKAG3
Protein kinase AMP-activated non-catalytic subunit gamma 3.
   
 0.986
PRKAG1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.983
PRKAG2
Uncharacterized protein.
   
 0.983
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
  
 
0.983
STK11
Serine/threonine kinase 11.
    
 0.974
TSC2
TSC complex subunit 2.
   
 0.962
RPTOR
Regulatory associated protein of MTOR complex 1.
     
 0.952
TSC1
TSC complex subunit 1.
     
 0.950
Your Current Organism:
Sarcophilus harrisii
NCBI taxonomy Id: 9305
Other names: S. harrisii, Sarcophilus laniarius, Tasmanian devil
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