STRINGSTRING
ldh1 protein (Staphylococcus aureus COL) - STRING interaction network
"ldh1" - L-lactate dehydrogenase in Staphylococcus aureus COL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldh1L-lactate dehydrogenase; Appears to be the primary factor that allows S.aureus growth during nitrosative stress in both aerobically and anaerobically cultured cells (317 aa)    
Predicted Functional Partners:
pyk
Pyruvate kinase (585 aa)
   
  0.996
gltA
Citrate synthase (373 aa)
   
  0.979
fumC
Fumarate hydratase; Catalyzes the reversible addition of water to fumarate to give L-malate (461 aa)
   
  0.952
ldhD
D-lactate dehydrogenase (330 aa)
   
  0.947
pflB
Formate acetyltransferase (749 aa)
   
 
  0.945
gltB
Glutamate synthase (1499 aa)
   
 
  0.934
pgi
Glucose-6-phosphate isomerase (443 aa)
   
 
  0.934
SACOL2574
D-lactate dehydrogenase (332 aa)
   
  0.927
SACOL1749
NADP-dependent malic enzyme (409 aa)
   
  0.925
budB
Acetolactate synthase (554 aa)
   
 
  0.924
Your Current Organism:
Staphylococcus aureus COL
NCBI taxonomy Id: 93062
Other names: S. aureus subsp. aureus COL, Staphylococcus aureus COL, Staphylococcus aureus subsp. aureus COL
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