STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DB74Unplaced genomic scaffold scaffold_289, whole genome shotgun sequence. (593 aa)    
Predicted Functional Partners:
A0A0D0DWP4
Unplaced genomic scaffold scaffold_680, whole genome shotgun sequence; Belongs to the SKP1 family.
    
 0.908
A0A0D0E003
Unplaced genomic scaffold scaffold_410, whole genome shotgun sequence.
    
 0.903
A0A0D0E7G2
Unplaced genomic scaffold scaffold_102, whole genome shotgun sequence.
    
 0.891
A0A0D0DR49
Unplaced genomic scaffold scaffold_227, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.883
A0A0D0DZP1
Unplaced genomic scaffold scaffold_433, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.883
A0A0D0DZQ6
Unplaced genomic scaffold scaffold_179, whole genome shotgun sequence; Belongs to the cullin family.
    
 0.883
A0A0D0E7R6
Unplaced genomic scaffold scaffold_94, whole genome shotgun sequence.
    
 0.883
A0A0D0DS52
Unplaced genomic scaffold scaffold_181, whole genome shotgun sequence.
    
 0.877
A0A0D0E0L5
Unplaced genomic scaffold scaffold_707, whole genome shotgun sequence.
    
 0.862
A0A0D0D3G7
Unplaced genomic scaffold scaffold_619, whole genome shotgun sequence.
    
  0.842
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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