STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DGP1Unplaced genomic scaffold scaffold_127, whole genome shotgun sequence. (837 aa)    
Predicted Functional Partners:
A0A0D0EAT6
Unplaced genomic scaffold scaffold_7, whole genome shotgun sequence.
   
 0.997
A0A0D0ED64
Unplaced genomic scaffold scaffold_9, whole genome shotgun sequence.
    
 0.990
A0A0D0E715
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.987
A0A0D0DM59
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.980
A0A0D0EBW3
Unplaced genomic scaffold scaffold_75, whole genome shotgun sequence.
    
 0.979
A0A0D0DZZ5
Unplaced genomic scaffold scaffold_412, whole genome shotgun sequence.
    
 0.971
A0A0D0DWP0
Unplaced genomic scaffold scaffold_292, whole genome shotgun sequence.
   
 0.965
A0A0D0DDP5
Unplaced genomic scaffold scaffold_804, whole genome shotgun sequence; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.955
A0A0D0DAM2
Unplaced genomic scaffold scaffold_1068, whole genome shotgun sequence; Belongs to the synaptobrevin family.
   
 0.946
A0A0D0DG94
Unplaced genomic scaffold scaffold_141, whole genome shotgun sequence.
   
 0.945
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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