STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DKJ2Unplaced genomic scaffold scaffold_52, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (860 aa)    
Predicted Functional Partners:
A0A0D0DB32
RBR-type E3 ubiquitin transferase.
    
 0.983
A0A0D0DWK9
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.901
A0A0D0D5X4
Unplaced genomic scaffold scaffold_487, whole genome shotgun sequence.
    
 0.894
A0A0D0E943
Unplaced genomic scaffold scaffold_47, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.874
A0A0D0EAD4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.871
A0A0D0DNV4
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
 0.870
A0A0D0E954
Unplaced genomic scaffold scaffold_46, whole genome shotgun sequence; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.869
A0A0D0E8A2
Unplaced genomic scaffold scaffold_75, whole genome shotgun sequence; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.866
A0A0D0E1C7
Unplaced genomic scaffold scaffold_311, whole genome shotgun sequence.
   
 0.865
A0A0D0C4M7
Unplaced genomic scaffold scaffold_1897, whole genome shotgun sequence.
    
 
 0.857
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.