STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DN74Unplaced genomic scaffold scaffold_14, whole genome shotgun sequence. (249 aa)    
Predicted Functional Partners:
A0A0D0EBZ4
Unplaced genomic scaffold scaffold_69, whole genome shotgun sequence.
     
0.809
A0A0D0E9W3
Unplaced genomic scaffold scaffold_181, whole genome shotgun sequence.
    
 0.691
A0A0D0DST6
Unplaced genomic scaffold scaffold_577, whole genome shotgun sequence.
    
  0.657
A0A0D0E0A8
Unplaced genomic scaffold scaffold_152, whole genome shotgun sequence.
    
  0.657
A0A0D0E6E4
Unplaced genomic scaffold scaffold_133, whole genome shotgun sequence.
    
  0.657
A0A0D0E1H7
Unplaced genomic scaffold scaffold_303, whole genome shotgun sequence; Belongs to the OSBP family.
    
 0.589
A0A0D0DJW0
Unplaced genomic scaffold scaffold_59, whole genome shotgun sequence.
    
  0.568
A0A0D0DT43
Unplaced genomic scaffold scaffold_141, whole genome shotgun sequence; Belongs to the OSBP family.
    
  0.568
A0A0D0DZ76
Unplaced genomic scaffold scaffold_479, whole genome shotgun sequence; Belongs to the OSBP family.
    
  0.568
A0A0D0E215
Unplaced genomic scaffold scaffold_280, whole genome shotgun sequence.
 
  
 
 0.542
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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