STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D0DV46Unplaced genomic scaffold scaffold_378, whole genome shotgun sequence. (731 aa)    
Predicted Functional Partners:
A0A0D0DWU7
Unplaced genomic scaffold scaffold_287, whole genome shotgun sequence.
 
 0.962
A0A0D0E2Z7
Unplaced genomic scaffold scaffold_238, whole genome shotgun sequence; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.899
A0A0D0DX61
Unplaced genomic scaffold scaffold_20, whole genome shotgun sequence.
  
 0.863
A0A0D0C2R3
Unplaced genomic scaffold scaffold_2171, whole genome shotgun sequence.
  
 0.828
A0A0D0CDF4
Unplaced genomic scaffold scaffold_1120, whole genome shotgun sequence.
  
 0.828
A0A0D0CQ09
Unplaced genomic scaffold scaffold_2171, whole genome shotgun sequence.
  
 0.828
A0A0D0CYN0
Unplaced genomic scaffold scaffold_5862, whole genome shotgun sequence.
  
 0.828
A0A0D0CYN6
Unplaced genomic scaffold scaffold_1120, whole genome shotgun sequence.
  
 0.828
A0A0D0D7G7
Unplaced genomic scaffold scaffold_417, whole genome shotgun sequence.
  
 0.828
A0A0D0DAD0
Unplaced genomic scaffold scaffold_2171, whole genome shotgun sequence.
  
 0.828
Your Current Organism:
Paxillus rubicundulus
NCBI taxonomy Id: 930991
Other names: P. rubicundulus Ve08.2h10, Paxillus rubicundulus Ve08.2h10
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