STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C448_08834Dipeptide ABC transporter dipeptide-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (627 aa)    
Predicted Functional Partners:
C448_03686
Dipeptide ABC transporter ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
 
 0.968
C448_08839
Putative dipeptides/oligopeptides ABC transporter permease; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.949
C448_08844
Binding-protein-dependent transporters inner membrane component; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.944
C448_08854
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component.
 
 0.916
C448_08849
COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
 
 0.913
C448_03696
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.896
C448_01062
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.892
C448_03701
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.887
C448_01067
Binding-protein-dependent transport system inner membrane protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.879
C448_05618
ABC transporter integral membrane protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.843
Your Current Organism:
Halococcus morrhuae
NCBI taxonomy Id: 931277
Other names: H. morrhuae DSM 1307, Halococcus morrhuae DSM 1307, Halococcus morrhuae JCM 8876, Halococcus morrhuae NRC 16008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.