STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO06174.1Protein of unknown function. (311 aa)    
Predicted Functional Partners:
SEO06148.1
Toprim domain-containing protein.
 
     0.784
SEO28745.1
Toprim domain-containing protein.
 
     0.784
SEO20466.1
Chromosome partitioning protein, ParB family.
 
     0.778
SEO33941.1
Chromosome partitioning protein, ParB family.
 
     0.778
SEO22671.1
Chromosome partitioning protein, ParB family.
 
     0.777
SEO22701.1
ParB-like nuclease domain-containing protein.
 
     0.777
SEO20430.1
ParB/RepB/Spo0J family partition protein.
 
     0.776
SEO06114.1
Methyltransferase domain-containing protein.
 
     0.772
SEO28786.1
Phospholipid N-methyltransferase.
 
     0.772
SEO05523.1
Hypothetical protein.
 
     0.758
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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