A0A067PHS9 protein (Jaapia argillacea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A067PHS9

Uncharacterized protein. (542 aa)

Predicted Functional Partners:

A0A067QN58

0.839

A0A067PH61

0.789

A0A067PS72

0.789

A0A067PZT4

0.729

A0A067QLU6

0.720

A0A067QPB6

0.720

A0A067PX47

0.689

A0A067PX74

0.689

A0A067PZX6

0.689

A0A067Q9B2

0.689

Your Current Organism:

Jaapia argillacea

NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067PH61	A0A067PHS9	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A067PH61	A0A067PS72	Uncharacterized protein.	XRN_N domain-containing protein.	0.941
A0A067PH61	A0A067PX47	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A067PH61	A0A067PX74	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A067PH61	A0A067PZT4	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A067PH61	A0A067PZX6	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A067PH61	A0A067Q9B2	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.861
A0A067PH61	A0A067QN58	Uncharacterized protein.	Uncharacterized protein.	0.743
A0A067PHS9	A0A067PH61	Uncharacterized protein.	Uncharacterized protein.	0.789
A0A067PHS9	A0A067PS72	Uncharacterized protein.	XRN_N domain-containing protein.	0.789
A0A067PHS9	A0A067PX47	Uncharacterized protein.	Uncharacterized protein.	0.689
A0A067PHS9	A0A067PX74	Uncharacterized protein.	Uncharacterized protein.	0.689
A0A067PHS9	A0A067PZT4	Uncharacterized protein.	Uncharacterized protein.	0.729
A0A067PHS9	A0A067PZX6	Uncharacterized protein.	Uncharacterized protein.	0.689
A0A067PHS9	A0A067Q9B2	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.689
A0A067PHS9	A0A067QLU6	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.720
A0A067PHS9	A0A067QN58	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A067PHS9	A0A067QPB6	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.720
A0A067PS72	A0A067PH61	XRN_N domain-containing protein.	Uncharacterized protein.	0.941
A0A067PS72	A0A067PHS9	XRN_N domain-containing protein.	Uncharacterized protein.	0.789