STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067QKI1Uncharacterized protein. (675 aa)    
Predicted Functional Partners:
A0A067PTW1
Brix domain-containing protein.
   
 
 0.952
A0A067QC78
Ribosomal_L18_c domain-containing protein.
    
 
 0.944
A0A067QBY3
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.905
A0A067Q372
Brix domain-containing protein.
   
    0.880
A0A067QL40
WD_REPEATS_REGION domain-containing protein.
   
  
 0.876
A0A067PPD6
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.836
A0A067Q3J2
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.835
A0A067PJ09
WD_REPEATS_REGION domain-containing protein.
   
    0.834
A0A067Q266
WD_REPEATS_REGION domain-containing protein.
   
    0.828
A0A067PSA8
NUC173 domain-containing protein.
   
  
 0.826
Your Current Organism:
Jaapia argillacea
NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604
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