STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000472805_01743Unannotated protein. (351 aa)    
Predicted Functional Partners:
GCA_000472805_03401
Unannotated protein.
   
 0.973
GCA_000472805_01344
Unannotated protein.
    
 0.945
GCA_000472805_00605
Unannotated protein.
    
 0.913
GCA_000472805_01885
Unannotated protein.
    
 0.913
GCA_000472805_03198
Unannotated protein.
   
 0.907
GCA_000472805_00953
Unannotated protein.
    
 0.894
GCA_000472805_02172
Unannotated protein.
    
 0.894
GCA_000472805_02757
Unannotated protein.
    
 0.894
GCA_000472805_03046
Unannotated protein.
    
 0.894
GCA_000472805_03474
Unannotated protein.
    
 0.894
Your Current Organism:
Desulfosarcina sp. BuS5
NCBI taxonomy Id: 933262
Other names: D. sp. BuS5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.