STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519005_00649Unannotated protein. (191 aa)    
Predicted Functional Partners:
GCA_000519005_03799
Unannotated protein.
    
 0.979
GCA_000519005_02692
Unannotated protein.
  
 0.978
GCA_000519005_04368
Unannotated protein.
    
  0.967
GCA_000519005_00650
Unannotated protein.
 
     0.945
GCA_000519005_00651
Unannotated protein.
 
     0.933
GCA_000519005_00652
Unannotated protein.
 
    0.913
GCA_000519005_00654
Unannotated protein.
 
     0.909
GCA_000519005_03950
Unannotated protein.
    
  0.909
GCA_000519005_00653
Unannotated protein.
 
    0.905
GCA_000519005_00656
Unannotated protein.
 
    0.904
Your Current Organism:
Nocardioides sp. J54
NCBI taxonomy Id: 935866
Other names: N. sp. J54
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.