STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000427425_01357Unannotated protein. (130 aa)    
Predicted Functional Partners:
GCA_000427425_01358
Unannotated protein.
     0.989
GCA_000427425_01324
Unannotated protein.
 
 0.980
GCA_000427425_02141
Unannotated protein.
 
 
 0.968
GCA_000427425_01359
Unannotated protein.
 
 
 
 0.944
GCA_000427425_01360
Unannotated protein.
 
  
 0.890
GCA_000427425_02146
Unannotated protein.
 
 
 
 0.876
GCA_000427425_01362
Unannotated protein.
 
   
 0.831
GCA_000427425_02140
Unannotated protein.
 
   
 0.748
GCA_000427425_02145
Unannotated protein.
 
  
 0.739
GCA_000427425_01361
Unannotated protein.
 
     0.632
Your Current Organism:
Caldanaerobius polysaccharolyticus
NCBI taxonomy Id: 935948
Other names: C. polysaccharolyticus DSM 13641, Caldanaerobius polysaccharolyticus DSM 13641, Caldanaerobius polysaccharolyticus KMTHCJ, Caldanaerobius polysaccharolyticus str. DSM 13641, Caldanaerobius polysaccharolyticus strain DSM 13641, anaerobic thermophile KMTHCJ
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.