STRINGSTRING
CopA protein (Helicobacter felis) - STRING interaction network
"CopA" - Copper-transporting ATPase in Helicobacter felis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CopACopper-transporting ATPase; Probably involved in copper export (732 aa)    
Predicted Functional Partners:
CopP
COP-associated protein; Part of a cation-transporting system which is associated with copper export out of the H.pylori cells (66 aa)
     
 
  0.924
pssA
annotation not available (234 aa)
   
   
  0.894
msbA
annotation not available (551 aa)
   
        0.890
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In the central section; belongs to the AAA ATPase family (638 aa)
   
        0.888
wlaM
annotation not available (302 aa)
              0.857
prmA
annotation not available (303 aa)
              0.854
CBY83346.1
annotation not available (217 aa)
              0.845
cheY
annotation not available (124 aa)
         
  0.819
CBY83338.1
annotation not available (206 aa)
         
  0.594
CBY83337.1
annotation not available (74 aa)
              0.429
Your Current Organism:
Helicobacter felis
NCBI taxonomy Id: 936155
Other names: H. felis ATCC 49179, Helicobacter felis, Helicobacter felis ATCC 49179, Helicobacter felis ATCC49179, Helicobacter felis CCUG 28539, Helicobacter felis CS1, Helicobacter felis str. ATCC 49179, Helicobacter felis strain ATCC 49179
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