STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_007592tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (530 aa)    
Predicted Functional Partners:
CVT25_003273
Ribosomal_L7Ae domain-containing protein.
   
 0.990
CVT25_012841
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.989
CVT25_002636
Uncharacterized protein.
   
 0.989
CVT25_014205
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.988
CVT25_000245
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.988
CVT25_011108
Uncharacterized protein.
   
 0.987
CVT25_009872
Ribosomal_L18_c domain-containing protein.
   
 0.987
CVT25_002746
Uncharacterized protein.
   
 0.987
CVT25_009421
Uncharacterized protein.
  
 0.986
CVT25_008217
Uncharacterized protein.
   
 0.985
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.