CVT25_015783 protein (Psilocybe cyanescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CVT25_015783

Bms1-type G domain-containing protein. (791 aa)

Predicted Functional Partners:

CVT25_014813

0.999

CVT25_011104

0.999

CVT25_003443

0.999

CVT25_010207

0.998

CVT25_015260

0.996

CVT25_011029

0.995

CVT25_004919

0.995

CVT25_006523

0.987

CVT25_015256

0.987

CVT25_005421

0.984

Your Current Organism:

Psilocybe cyanescens

NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CVT25_003443	CVT25_004919	A0A409WM66	A0A409XTV1	Uncharacterized protein.	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	0.998
CVT25_003443	CVT25_005421	A0A409WM66	A0A409VQR1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.995
CVT25_003443	CVT25_006523	A0A409WM66	A0A409XEI6	Uncharacterized protein.	Uncharacterized protein.	0.991
CVT25_003443	CVT25_010207	A0A409WM66	A0A409XD19	Uncharacterized protein.	RIO domain-containing protein.	0.995
CVT25_003443	CVT25_011029	A0A409WM66	A0A409WFC8	Uncharacterized protein.	NUC173 domain-containing protein.	0.998
CVT25_003443	CVT25_011104	A0A409WM66	A0A409WGP0	Uncharacterized protein.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.999
CVT25_003443	CVT25_014813	A0A409WM66	A0A409WES5	Uncharacterized protein.	Uncharacterized protein.	0.999
CVT25_003443	CVT25_015256	A0A409WM66	A0A409XRB3	Uncharacterized protein.	Uncharacterized protein.	0.992
CVT25_003443	CVT25_015260	A0A409WM66	A0A409XR24	Uncharacterized protein.	KH domain-containing protein.	0.999
CVT25_003443	CVT25_015783	A0A409WM66	A0A409X1E8	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.999
CVT25_004919	CVT25_003443	A0A409XTV1	A0A409WM66	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Uncharacterized protein.	0.998
CVT25_004919	CVT25_005421	A0A409XTV1	A0A409VQR1	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.905
CVT25_004919	CVT25_006523	A0A409XTV1	A0A409XEI6	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Uncharacterized protein.	0.967
CVT25_004919	CVT25_010207	A0A409XTV1	A0A409XD19	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	RIO domain-containing protein.	0.983
CVT25_004919	CVT25_011029	A0A409XTV1	A0A409WFC8	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	NUC173 domain-containing protein.	0.953
CVT25_004919	CVT25_011104	A0A409XTV1	A0A409WGP0	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.	0.961
CVT25_004919	CVT25_014813	A0A409XTV1	A0A409WES5	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Uncharacterized protein.	0.985
CVT25_004919	CVT25_015256	A0A409XTV1	A0A409XRB3	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Uncharacterized protein.	0.954
CVT25_004919	CVT25_015260	A0A409XTV1	A0A409XR24	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	KH domain-containing protein.	0.976
CVT25_004919	CVT25_015783	A0A409XTV1	A0A409X1E8	rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.	Bms1-type G domain-containing protein.	0.995