STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CVT25_007731ENDO3c domain-containing protein. (349 aa)    
Predicted Functional Partners:
CVT25_015283
Amidophosphoribosyltransferase.
 
      0.850
CVT25_015260
KH domain-containing protein.
    
  0.449
CVT25_015256
Uncharacterized protein.
    
  0.448
CVT25_009769
Uncharacterized protein.
    
  0.440
CVT25_001555
Uncharacterized protein.
    
  0.425
CVT25_009270
Uncharacterized protein.
   
  0.418
CVT25_000666
SWIB domain-containing protein.
    
  0.413
CVT25_011569
SWIB domain-containing protein.
    
  0.412
CVT25_003237
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
  0.403
CVT25_003695
F-box domain-containing protein.
    
  0.403
Your Current Organism:
Psilocybe cyanescens
NCBI taxonomy Id: 93625
Other names: P. cyanescens, PRM 901481
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